{"id":"listed:org_bc7d4126a2dd","name":"Center for Spatial Omics","websites":[],"providerType":"CRO / CDMO","organizationId":null,"facilities":[],"origin":"directory","level":"listed","countryCode":"US","country":"United States","offerings":[],"published":{"description":"The Center for Spatial Omics (CSO) at St. Jude, established as part of the 2022-2027 Strategic Plan, is a shared resource that uses advanced spatial omics platforms to study cell interactions and organization in tissues at single-cell resolution while maintaining tissue architecture.","descriptionSourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html","capabilities":[{"label":"Primary processing and pipeline development","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Image processing","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Cell segmentation","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Molecular quantification","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Quality control (QC)","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Filtering and normalization","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Cell-type deconvolution and annotation","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Advanced spatial analytics","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Multi-omic integration","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Interactive visualization and support","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Custom antibody testing services","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Custom probe spike-in services","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Custom RNA probe and antibody design","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Custom probe design","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Custom antibody conjugation services","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Custom Panel and Antibody Design","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Illumina Spatial Sequencing","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"GeoMx Digital Spatial Profiler","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Visium HD","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"CosMx Spatial Molecular Imager","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Xenium In Situ","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"PhenoCycler Fusion","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Spatial transcriptomics","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Cell-cell interaction analysis","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"High-level multiplexing","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Nucleic acid sequencing","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html","term":"capability/nucleic-acid-sequencing","phrase":"Next-generation sequencing"},{"label":"Whole transcriptome profiling","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"High-resolution imaging","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Multi-Omics","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Bioinformatic analysis","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"High-plex protein detection","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"},{"label":"Interactive dashboards","sourceUrl":"https://www.stjude.org/research/why-st-jude/shared-resources/spatial-omics.html"}],"modalities":[],"quality":[],"equipment":[],"sites":[],"facets":{"capability":["Nucleic acid sequencing"]}},"light":{"description":null,"evidenceUrl":null,"ownSite":"https://www.stjude.org/","hqCountry":null,"providerTypes":[]},"normalized":{"tradingName":"Center for Spatial Omics","capabilities":["Primary processing and pipeline development","Image processing","Cell segmentation","Molecular quantification","Quality control (QC)","Filtering and normalization","Cell-type deconvolution and annotation","Advanced spatial analytics","Multi-omic integration","Interactive visualization and support","Custom antibody testing services","Custom probe spike-in services","Custom RNA probe and antibody design","Custom probe design","Custom antibody conjugation services","Custom Panel and Antibody Design","Illumina Spatial Sequencing","GeoMx Digital Spatial Profiler","Visium HD","CosMx Spatial Molecular Imager","Xenium In Situ","PhenoCycler Fusion","Spatial transcriptomics","Cell-cell interaction analysis","High-level multiplexing","Nucleic acid sequencing","Whole transcriptome profiling","High-resolution imaging","Multi-Omics","Bioinformatic analysis","High-plex protein detection","Interactive dashboards"],"equipment":[],"leadTimes":[],"sites":[],"sources":[],"quotes":[]}}